U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

snr1 mitochondrial 37S ribosomal protein mS47 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540394, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
snr1
Official Full Name
mitochondrial 37S ribosomal protein mS47
Primary source
PomBase:SPBC2D10.09
Locus tag
SPOM_SPBC2D10.09
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See snr1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (2981002..2982440)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene MBF transcription factor activator Rep1 Neighboring gene ncRNA Neighboring gene endopeptidase catalytic subunit Neighboring gene ncRNA Neighboring gene mitochondrial 54S ribosomal protein uL4m Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene fibrillarin, rRNA and histone methyltransferase Neighboring gene ncRNA Neighboring gene nucleosome assembly protein Nap2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Cross-species protein interactome mapping reveals species-specific wiring of stress response pathways. Das J, et al. Sci Signal, 2013 May 21. PMID 23695164, Free PMC Article
  2. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables 3-hydroxyisobutyryl-CoA hydrolase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in mitochondrial translation ISO
Inferred from Sequence Orthology
more info
  
involved_in valine catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit ISO
Inferred from Sequence Orthology
more info
  
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
mitochondrial 37S ribosomal protein mS47

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2981002..2982440
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022148.3 → NP_596228.1  mitochondrial 37S ribosomal protein mS47 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596228.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74802
    Conserved Domains (2) summary
    PRK05617
    Location:54 → 384
    PRK05617; 3-hydroxyisobutyryl-CoA hydrolase; Provisional
    pfam16113
    Location:67 → 384
    ECH_2; Enoyl-CoA hydratase/isomerase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous