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ngg1 SAGA complex subunit Ngg1/Ada3 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540436, updated on 18-Sep-2024

Summary

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Official Symbol
ngg1
Official Full Name
SAGA complex subunit Ngg1/Ada3
Primary source
PomBase:SPBC28F2.10c
Locus tag
SPOM_SPBC28F2.10C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
ada3; kap1
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Genomic context

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See ngg1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (1586592..1588398, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene DNA recombination mediator Sfr1 Neighboring gene HRD ubiquitin ligase complex subunit Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transcription factor TFIIA complex large subunit Toa1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene upstream binding transcription factor, RNA polymerase I specific, Hmo1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning and characterization of the kinesin-related protein, Krp1p, in Schizosaccharomyces pombe. Jeong JW, et al. Mol Cells, 2002 Jun 30. PMID 12132578
  2. Nucleosome eviction in mitosis assists condensin loading and chromosome condensation. Toselli-Mollereau E, et al. EMBO J, 2016 Jul 15. PMID 27266525, Free PMC Article
  3. The SAGA histone acetyltransferase complex regulates leucine uptake through the Agp3 permease in fission yeast. Takahashi H, et al. J Biol Chem, 2012 Nov 2. PMID 22992726, Free PMC Article
  4. Anti-silencing factor Epe1 associates with SAGA to regulate transcription within heterochromatin. Bao K, et al. Genes Dev, 2019 Jan 1. PMID 30573453, Free PMC Article
  5. Mitotic spindle formation in the absence of Polo kinase. Kim J, et al. Proc Natl Acad Sci U S A, 2022 Mar 22. PMID 35286199, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables transcription coactivator activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II EXP
Inferred from Experiment
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in transcription initiation-coupled chromatin remodeling IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
part_of SAGA complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of SAGA complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of SAGA complex IPI
Inferred from Physical Interaction
more info
 PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
SAGA complex subunit Ngg1/Ada3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1586592..1588398 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021566.3 → NP_595671.1  SAGA complex subunit Ngg1/Ada3 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595671.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9USU8
    Conserved Domains (1) summary
    pfam10198
    Location:390 → 508
    Ada3; Histone acetyltransferases subunit 3
Nucleotide Protein
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