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oms1 methyltransferase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540448, updated on 22-Jun-2024

Summary

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Gene symbol
oms1
Gene description
methyltransferase
Locus tag
SPOM_SPBC3B9.04
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPBC3B9.04
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Genomic context

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See oms1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (3995544..3996594)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Hsp70 nucleotide exchange factor Neighboring gene splicing factor Cwf28 Neighboring gene ncRNA Neighboring gene signal recognition particle receptor alpha subunit Srp101 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene mRNA-decapping complex regulatory subunit Dcp1 Neighboring gene protein TIM chaperone Neighboring gene ncRNA Neighboring gene autophagy-associated protein Atg3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables mRNA m(6)A methyltransferase activity ISO
Inferred from Sequence Orthology
more info
  
enables methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in mitochondrial gene expression IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
is_active_in mitochondrion HDA PubMed 

General protein information

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Preferred Names
methyltransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3995544..3996594
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022583.3 → NP_596661.1  methyltransferase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596661.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O43033
    Conserved Domains (2) summary
    COG0500
    Location:47 → 198
    SmtA; SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]
    pfam13489
    Location:75 → 233
    Methyltransf_23; Methyltransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials