U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

sap14 Pre-mRNA branch site p14-like protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540462, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
sap14
Official Full Name
Pre-mRNA branch site p14-like protein
Primary source
PomBase:SPBC29A3.07c
Locus tag
SPOM_SPBC29A3.07C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
SF3b14a
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See sap14 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (2049997..2050768, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Swr1 complex histone chaperone module subunit Vps71 Neighboring gene putative CGI-48 family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene putative elongin-A Pof4 Neighboring gene ncRNA Neighboring gene AAA family ATPase Gcn20

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A U1-U2 snRNP interaction network during intron definition. Shao W, et al. Mol Cell Biol, 2012 Jan. PMID 22064476, Free PMC Article
  2. Dim1p is required for efficient splicing and export of mRNA encoding lid1p, a component of the fission yeast anaphase-promoting complex. Carnahan RH, et al. Eukaryot Cell, 2005 Mar. PMID 15755920, Free PMC Article
  3. Sde2 is an intron-specific pre-mRNA splicing regulator activated by ubiquitin-like processing. Thakran P, et al. EMBO J, 2018 Jan 4. PMID 28947618, Free PMC Article
  4. The histone variant H2A.Z promotes splicing of weak introns. Nissen KE, et al. Genes Dev, 2017 Apr 1. PMID 28446597, Free PMC Article
  5. Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth. Rallis C, et al. Biol Open, 2014 Feb 15. PMID 24463365, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables RNA binding ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in mRNA cis splicing, via spliceosome EXP
Inferred from Experiment
more info
 PubMed 
Component Evidence Code Pubs
part_of U2 snRNP IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Pre-mRNA branch site p14-like protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2049997..2050768 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021739.4 → NP_595835.2  Pre-mRNA branch site p14-like protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595835.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O59670
    Conserved Domains (2) summary
    COG0724
    Location:2 → 88
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12241
    Location:10 → 86
    RRM_SF3B14; RNA recognition motif found in pre-mRNA branch site protein p14 (SF3B14) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials