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bpl1 biotin-protein ligase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540476, updated on 18-Sep-2024

Summary

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Official Symbol
bpl1
Official Full Name
biotin-protein ligase
Primary source
PomBase:SPBC30D10.07c
Locus tag
SPOM_SPBC30D10.07C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See bpl1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (3085966..3088899)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ER membrane organization protein, HVA22/TB2/DP1 family protein Neighboring gene ncRNA Neighboring gene DNA repair protein Neighboring gene U6 snRNP-associated protein Lsm4 Neighboring gene ncRNA Neighboring gene sepiapterin reductase Neighboring gene chaperone protein Mzm1 Neighboring gene ncRNA Neighboring gene replication fork protection complex subunit Swi3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  3. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article
  4. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene. Lang BF, et al. J Mol Biol, 1985 Aug 5. PMID 4046021
  5. Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe. Trinkl H, et al. Nucleic Acids Res, 1989 Aug 25. PMID 2780299, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables biotin--[biotin carboxyl-carrier protein] ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in protein maturation NAS
Non-traceable Author Statement
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
biotin-protein ligase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3085966..3088899
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022199.3 → NP_596278.1  biotin-protein ligase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596278.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14353
    Conserved Domains (3) summary
    COG0340
    Location:360 → 621
    BirA2; Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme transport and metabolism]
    pfam03099
    Location:358 → 503
    BPL_LplA_LipB; Biotin/lipoate A/B protein ligase family
    pfam09825
    Location:2 → 343
    BPL_N; Biotin-protein ligase, N terminal
Nucleotide Protein
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