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SPOM_SPBC27B12.07 uncharacterized protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540478, updated on 22-Jun-2024

Summary

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Gene symbol
SPOM_SPBC27B12.07
Gene description
uncharacterized protein
Locus tag
SPOM_SPBC27B12.07
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPBC27B12.07
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Genomic context

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See SPOM_SPBC27B12.07 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (1333991..1335608)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene WD repeat protein Crt10, involved in ribosomal RNA decay Neighboring gene ncRNA Neighboring gene pig-O family ethanolamine phosphate transferase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Pof6-interacting protein Sip1 AP-1 accessory protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in proline metabolic process ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in mitochondrial inner membrane ISO
Inferred from Sequence Orthology
more info
  
is_active_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1333991..1335608
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021450.3 → NP_595539.1  uncharacterized protein SPOM_SPBC27B12.07 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595539.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13662, O42997
    Conserved Domains (1) summary
    pfam07798
    Location:79 → 250
    DUF1640; Protein of unknown function (DUF1640)
Nucleotide Protein
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Gene LinkOut

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