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tsf1 translation elongation factor EF-Ts Tsf1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540692, updated on 18-Sep-2024

Summary

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Official Symbol
tsf1
Official Full Name
translation elongation factor EF-Ts Tsf1
Primary source
PomBase:SPBC800.07c
Locus tag
SPOM_SPBC800.07C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See tsf1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (263802..264897, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene tubulin alpha 2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ribosome biogenesis protein brx1 Neighboring gene ncRNA Neighboring gene translation initiation factor eIF-3 gamma subunit Gcd10 Neighboring gene ncRNA Neighboring gene translation initiation inhibitor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tdp1 protects against oxidative DNA damage in non-dividing fission yeast. Ben Hassine S, et al. EMBO J, 2009 Mar 18. PMID 19197239, Free PMC Article
  2. Mitochondrial translation: elongation factor tu is essential in fission yeast and depends on an exchange factor conserved in humans but not in budding yeast. Chiron S, et al. Genetics, 2005 Apr. PMID 15695360, Free PMC Article
  3. Pfh1 Is an Accessory Replicative Helicase that Interacts with the Replisome to Facilitate Fork Progression and Preserve Genome Integrity. McDonald KR, et al. PLoS Genet, 2016 Sep. PMID 27611590, Free PMC Article
  4. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article
  5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables translation elongation factor activity EXP
Inferred from Experiment
more info
 PubMed 
enables translation elongation factor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in mitochondrial translation EXP
Inferred from Experiment
more info
 PubMed 
involved_in mitochondrial translational elongation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in mitochondrial translational elongation IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
is_active_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
translation elongation factor EF-Ts Tsf1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    263802..264897 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021015.3 → NP_595108.1  translation elongation factor EF-Ts Tsf1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595108.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9HGL5
    Conserved Domains (3) summary
    COG0264
    Location:29 → 299
    Tsf; Translation elongation factor EF-Ts [Translation, ribosomal structure and biogenesis]
    cd14275
    Location:35 → 72
    UBA_EF-Ts; UBA domain found in elongation factor Ts (EF-Ts) from bacteria, chloroplasts and mitochondria of eukaryotes
    pfam00889
    Location:106 → 279
    EF_TS; Elongation factor TS
Nucleotide Protein
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