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iws1 transcription elongation factor complex subunit Iws1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540721, updated on 18-Sep-2024

Summary

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Official Symbol
iws1
Official Full Name
transcription elongation factor complex subunit Iws1
Primary source
PomBase:SPBC19G7.16
Locus tag
SPOM_SPBC19G7.16
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See iws1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (2380617..2382242)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene nucleoporin Nup44 Neighboring gene ncRNA Neighboring gene TOM complex subunit Tom5 Neighboring gene ncRNA Neighboring gene translocon subunit Sec61-like protein Neighboring gene ncRNA Neighboring gene ER to Golgi ceramide transport protein, lipocalin superfamily Svf2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Spt6 is required for heterochromatic silencing in the fission yeast Schizosaccharomyces pombe. Kiely CM, et al. Mol Cell Biol, 2011 Oct. PMID 21844224, Free PMC Article
  2. An interactive gene network for securin-separase, condensin, cohesin, Dis1/Mtc1 and histones constructed by mass transformation. Yuasa T, et al. Genes Cells, 2004 Nov. PMID 15507118
  3. Systematic analysis reveals the prevalence and principles of bypassable gene essentiality. Li J, et al. Nat Commun, 2019 Mar 1. PMID 30824696, Free PMC Article
  4. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables transcription elongation factor activity NAS
Non-traceable Author Statement
more info
  
Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transcription elongation by RNA polymerase II ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in mitotic spindle HDA PubMed 
is_active_in nucleolus HDA PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of transcription elongation factor complex ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
transcription elongation factor complex subunit Iws1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2380617..2382242
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021889.3 → NP_595982.1  transcription elongation factor complex subunit Iws1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595982.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O42964
    Conserved Domains (1) summary
    COG5139
    Location:18 → 428
    COG5139; Uncharacterized conserved protein [Function unknown]
Nucleotide Protein
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