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ulp1 SUMO deconjugating enzyme Ulp1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540734, updated on 22-Jun-2024

Summary

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Gene symbol
ulp1
Gene description
SUMO deconjugating enzyme Ulp1
Locus tag
SPOM_SPBC19G7.09
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPBC19G7.09
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Genomic context

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See ulp1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (2367095..2369193)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene arrestin-related substrate adaptor for RhoGEF, Art1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene topoisomerase II-associated deadenylation-dependent mRNA-decapping factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cell-cycle-dependent localisation of Ulp1, a Schizosaccharomyces pombe Pmt3 (SUMO)-specific protease. Taylor DL, et al. J Cell Sci, 2002 Mar 15. PMID 11884512
  2. Pli1(PIAS1) SUMO ligase protected by the nuclear pore-associated SUMO protease Ulp1SENP1/2. Nie M, et al. J Biol Chem, 2015 Sep 11. PMID 26221037, Free PMC Article
  3. SUMO-Targeted DNA Translocase Rrp2 Protects the Genome from Top2-Induced DNA Damage. Wei Y, et al. Mol Cell, 2017 Jun 1. PMID 28552615
  4. The S. pombe translation initiation factor eIF4G is Sumoylated and associates with the SUMO protease Ulp2. Jongjitwimol J, et al. PLoS One, 2014. PMID 24818994, Free PMC Article
  5. Systematic analysis reveals the prevalence and principles of bypassable gene essentiality. Li J, et al. Nat Commun, 2019 Mar 1. PMID 30824696, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables SUMO-specific endopeptidase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables deSUMOylase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables deSUMOylase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables deSUMOylase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein desumoylation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein processing IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytosol HDA PubMed 
is_active_in nuclear envelope HDA PubMed 
is_active_in nuclear periphery IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
SUMO deconjugating enzyme Ulp1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2367095..2369193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021883.3 → NP_595975.1  SUMO deconjugating enzyme Ulp1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595975.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O42957
    Conserved Domains (2) summary
    COG5160
    Location:1 → 568
    ULP1; Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones]
    pfam02902
    Location:391 → 562
    Peptidase_C48; Ulp1 protease family, C-terminal catalytic domain
Nucleotide Protein
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