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mrps17 mitochondrial 37S ribosomal protein uS17m [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540774, updated on 18-Sep-2024

Summary

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Official Symbol
mrps17
Official Full Name
mitochondrial 37S ribosomal protein uS17m
Primary source
PomBase:SPBC409.14c
Locus tag
SPOM_SPBC409.14C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See mrps17 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (1166520..1167297, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein mim2 Neighboring gene 6,7-dimethyl-8-ribityllumazine synthase Neighboring gene ncRNA Neighboring gene rRNA processing protein Tsr2 Neighboring gene ncRNA Neighboring gene DNA recombination protein Saw1 Neighboring gene protein duc2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Systematic analysis reveals the prevalence and principles of bypassable gene essentiality. Li J, et al. Nat Commun, 2019 Mar 1. PMID 30824696, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in mitochondrial translation ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
mitochondrial 37S ribosomal protein uS17m

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1166520..1167297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021374.3 → NP_595464.1  mitochondrial 37S ribosomal protein uS17m [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595464.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UUB0
    Conserved Domains (1) summary
    COG0186
    Location:1 → 80
    RpsQ; Ribosomal protein S17 [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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