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rpl2502 60S ribosomal protein uL23 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540851, updated on 18-Sep-2024

Summary

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Official Symbol
rpl2502
Official Full Name
60S ribosomal protein uL23
Primary source
PomBase:SPBC4F6.04
Locus tag
SPOM_SPBC4F6.04
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
rpl23a-2; rpl25b
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Genomic context

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See rpl2502 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (2690821..2691722)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene sphingosine N-acyltransferase Lac1 Neighboring gene ncRNA Neighboring gene 2-isopropylmalate synthase Leu3 Neighboring gene ncRNA Neighboring gene lectin family glycoprotein receptor Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast. Mathiassen SG, et al. J Biol Chem, 2015 Aug 21. PMID 26152728, Free PMC Article
  2. Systematic analysis reveals the prevalence and principles of bypassable gene essentiality. Li J, et al. Nat Commun, 2019 Mar 1. PMID 30824696, Free PMC Article
  3. Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome. Telekawa C, et al. Nucleic Acids Res, 2018 Nov 30. PMID 30321377, Free PMC Article
  4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translation ISO
Inferred from Sequence Orthology
more info
  
involved_in cytosolic large ribosomal subunit assembly ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm HDA PubMed 
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
60S ribosomal protein uL23

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2690821..2691722
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022021.3 → NP_596104.1  60S ribosomal protein uL23 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596104.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74391
    Conserved Domains (3) summary
    PTZ00191
    Location:3 → 141
    PTZ00191; 60S ribosomal protein L23a; Provisional
    pfam03939
    Location:16 → 52
    Ribosomal_L23eN; Ribosomal protein L23, N-terminal domain
    cl00326
    Location:59 → 139
    Ribosomal_L23; Ribosomal protein L23
Nucleotide Protein
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