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ctu2 cytosolic thiouridylase subunit Ctu2 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540896, updated on 18-Sep-2024

Summary

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Official Symbol
ctu2
Official Full Name
cytosolic thiouridylase subunit Ctu2
Primary source
PomBase:SPBC19C2.13c
Locus tag
SPOM_SPBC19C2.13C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See ctu2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (1700751..1702117, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene mitochondrial 54S ribosomal protein mL43 Neighboring gene ncRNA Neighboring gene Sm snRNP core protein Smd3 Neighboring gene ncRNA Neighboring gene phosphoprotein phosphatase Phs1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The conserved Wobble uridine tRNA thiolase Ctu1-Ctu2 is required to maintain genome integrity. Dewez M, et al. Proc Natl Acad Sci U S A, 2008 Apr 8. PMID 18391219, Free PMC Article
  2. Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth. Rallis C, et al. Biol Open, 2014 Feb 15. PMID 24463365, Free PMC Article
  3. Phosphorylation of the RNA-binding protein Zfs1 modulates sexual differentiation in fission yeast. Navarro FJ, et al. J Cell Sci, 2017 Dec 15. PMID 29084823, Free PMC Article
  4. Expanded Interactome of the Intrinsically Disordered Protein Dss1. Schenstrøm SM, et al. Cell Rep, 2018 Oct 23. PMID 30355493, Free PMC Article
  5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables nucleotidyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables sulfurtransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
  
contributes_to tRNA-uridine 2-sulfurtransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein urmylation IEA
Inferred from Electronic Annotation
more info
  
involved_in tRNA wobble position uridine thiolation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in tRNA wobble position uridine thiolation IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic tRNA wobble base thiouridylase complex IPI
Inferred from Physical Interaction
more info
 PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
cytosolic thiouridylase subunit Ctu2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1700751..1702117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021595.3 → NP_595698.1  cytosolic thiouridylase subunit Ctu2 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595698.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UUC7
    Conserved Domains (2) summary
    cd01986
    Location:62 → 239
    Alpha_ANH_like; Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases and ATP sulphurylases. The domain forms a apha/beta/apha fold which binds to Adenosine group..
    pfam10288
    Location:268 → 347
    CTU2; Cytoplasmic tRNA 2-thiolation protein 2
Nucleotide Protein
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