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mfs3 spermidine family transporter [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540940, updated on 22-Jun-2024

Summary

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Gene symbol
mfs3
Gene description
spermidine family transporter
Locus tag
SPOM_SPBC36.03C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPBC36.03c
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Genomic context

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See mfs3 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (843017..845562, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene cysteine synthase Neighboring gene class 1 histone deacetylase Clr6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analyzing fission yeast multidrug resistance mechanisms to develop a genetically tractable model system for chemical biology. Kawashima SA, et al. Chem Biol, 2012 Jul 27. PMID 22840777, Free PMC Article
  2. Endocytosis is essential for dynamic translocation of a syntaxin 1 orthologue during fission yeast meiosis. Kashiwazaki J, et al. Mol Biol Cell, 2011 Oct. PMID 21832151, Free PMC Article
  3. Phosphorylation of the RNA-binding protein Zfs1 modulates sexual differentiation in fission yeast. Navarro FJ, et al. J Cell Sci, 2017 Dec 15. PMID 29084823, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables spermidine transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
  
enables spermine transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
  
enables transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in spermidine transmembrane transport IC
Inferred by Curator
more info
  
involved_in spermine transmembrane transport IC
Inferred by Curator
more info
  
involved_in transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in fungal-type vacuole IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in plasma membrane ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
spermidine family transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    843017..845562 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021239.3 → NP_595331.1  spermidine family transporter [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595331.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O59700
    Conserved Domains (2) summary
    cd06174
    Location:100 → 524
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:103 → 488
    MFS_1; Major Facilitator Superfamily
Nucleotide Protein
Heading Accession and Version

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