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SPOM_SPBC3F6.01C serine/threonine protein phosphatase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541004, updated on 22-Jun-2024

Summary

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Gene symbol
SPOM_SPBC3F6.01C
Gene description
serine/threonine protein phosphatase
Locus tag
SPOM_SPBC3F6.01C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPBC3F6.01c
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Genomic context

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See SPOM_SPBC3F6.01C in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (4184599..4186958, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene alkaline phosphatase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 3 beta-hydroxysteroid dehydrogenase/delta 5-to-4-isomerase Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
  2. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in signal transduction ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
serine/threonine protein phosphatase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    4184599..4186958 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022666.3 → NP_596740.1  serine/threonine protein phosphatase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596740.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O43049
    Conserved Domains (5) summary
    smart00156
    Location:184 → 456
    PP2Ac; Protein phosphatase 2A homologues, catalytic domain
    sd00006
    Location:5 → 33
    TPR; TPR repeat [structural motif]
    cd07417
    Location:152 → 467
    MPP_PP5_C; PP5, C-terminal metallophosphatase domain
    pfam07719
    Location:73 → 106
    TPR_2; Tetratricopeptide repeat
    pfam13414
    Location:4 → 70
    TPR_11; TPR repeat
Nucleotide Protein
Heading Accession and Version

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