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dus1 tRNA dihydrouridine synthase Dus1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541048, updated on 22-Jun-2024

Summary

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Gene symbol
dus1
Gene description
tRNA dihydrouridine synthase Dus1
Locus tag
SPOM_SPBC36B7.04
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPBC36B7.04
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Genomic context

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See dus1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (2389577..2390997)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene translocation subcomplex subunit Sec63 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ubiquitin-protein ligase E/phosphatidylinositol(3)-phosphate binding protein Neighboring gene protein mug20

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcription-wide mapping of dihydrouridine reveals that mRNA dihydrouridylation is required for meiotic chromosome segregation. Finet O, et al. Mol Cell, 2022 Jan 20. PMID 34798057, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables tRNA dihydrouridine synthase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables tRNA-dihydrouridine16 synthase activity EXP
Inferred from Experiment
more info
 PubMed 
enables tRNA-dihydrouridine17 synthase activity EXP
Inferred from Experiment
more info
 PubMed 
Component Evidence Code Pubs
is_active_in mitochondrion HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
tRNA dihydrouridine synthase Dus1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2389577..2390997
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021893.3 → NP_595986.1  tRNA dihydrouridine synthase Dus1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595986.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9HGN6
    Conserved Domains (2) summary
    COG0042
    Location:13 → 335
    DusA; tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
    cd02801
    Location:19 → 245
    DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...
Nucleotide Protein
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