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tcg1 single-stranded telomeric-binding protein Tgc1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541062, updated on 22-Jun-2024

Summary

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Gene symbol
tcg1
Gene description
single-stranded telomeric-binding protein Tgc1
Locus tag
SPOM_SPBC660.11
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
mug187
Old locus tag
SPBC660.11
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Genomic context

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See tcg1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (215099..216901)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene protein mug168 Neighboring gene mitochondrial translation elongation factor G Neighboring gene ergothioneine biosynthesis methyltransferase Egt2 Neighboring gene ncRNA Neighboring gene DNA replication factor A subunit Ssb1 Neighboring gene M phase inhibitor protein kinase Mik1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Exposure of single-stranded telomeric DNA causes G2/M cell cycle arrest in Saccharomyces cerevisiae. Pang TL, et al. J Biol Chem, 2003 Mar 14. PMID 12519786
  2. The S. pombe translation initiation factor eIF4G is Sumoylated and associates with the SUMO protease Ulp2. Jongjitwimol J, et al. PLoS One, 2014. PMID 24818994, Free PMC Article
  3. A novel histone deacetylase complex in the control of transcription and genome stability. Zilio N, et al. Mol Cell Biol, 2014 Sep 15. PMID 25002536, Free PMC Article
  4. Cotranscriptional recruitment of the nuclear poly(A)-binding protein Pab2 to nascent transcripts and association with translating mRNPs. Lemieux C, et al. Nucleic Acids Res, 2009 Jun. PMID 19336419, Free PMC Article
  5. The proper splicing of RNAi factors is critical for pericentric heterochromatin assembly in fission yeast. Kallgren SP, et al. PLoS Genet, 2014. PMID 24874881, Free PMC Article

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables single-stranded telomeric DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in telomere maintenance TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
is_active_in chromosome, telomeric repeat region IC
Inferred by Curator
more info
 PubMed 
is_active_in cytosol HDA PubMed 
is_active_in nuclear speck IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
single-stranded telomeric-binding protein Tgc1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    215099..216901
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020997.3 → NP_595090.2  single-stranded telomeric-binding protein Tgc1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595090.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94430, Q9HEQ9
    Conserved Domains (2) summary
    smart00360
    Location:207 → 291
    RRM; RNA recognition motif
    cl17169
    Location:46 → 124
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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