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ecm14 carboxypeptidase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541067, updated on 22-Jun-2024

Summary

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Gene symbol
ecm14
Gene description
carboxypeptidase
Locus tag
SPOM_SPBC337.07C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
ppp28
Old locus tag
SPBC337.07c
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Genomic context

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See ecm14 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003423.3 (1042110..1044094, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene chaperonin-containing T-complex theta subunit Cct8 Neighboring gene ncRNA Neighboring gene protein Cwf15 Neighboring gene ncRNA Neighboring gene protein modifier, ubiquitin Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The conserved Fanconi anemia nuclease Fan1 and the SUMO E3 ligase Pli1 act in two novel Pso2-independent pathways of DNA interstrand crosslink repair in yeast. Fontebasso Y, et al. DNA Repair (Amst), 2013 Dec. PMID 24192486, Free PMC Article
  2. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
NOT enables metallocarboxypeptidase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
carboxypeptidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1042110..1044094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021315.3 → NP_595408.1  carboxypeptidase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595408.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74818
    Conserved Domains (2) summary
    cd06248
    Location:180 → 492
    M14_CP_A-B_like_1; Peptidase M14 carboxypeptidase subfamily A/B-like; uncharacterized subgroup
    COG2866
    Location:42 → 479
    MpaA; Murein tripeptide amidase MpaA [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version

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