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ppk30 Ark1/Prk1 family protein kinase Ppk30 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541109, updated on 18-Sep-2024

Summary

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Official Symbol
ppk30
Official Full Name
Ark1/Prk1 family protein kinase Ppk30
Primary source
PomBase:SPBC6B1.02
Locus tag
SPOM_SPBC6B1.02
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See ppk30 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (2627299..2630878)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene TATA-binding protein-associated factor Mot1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pal1 family early clathrin mediated endocytosis factor, meiosis specific Pal2 Neighboring gene microtubule-site clamp monopolin complex subunit Mde4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Systematic deletion analysis of fission yeast protein kinases. Bimbó A, et al. Eukaryot Cell, 2005 Apr. PMID 15821139, Free PMC Article
  2. Mis17 is a regulatory module of the Mis6-Mal2-Sim4 centromere complex that is required for the recruitment of CenH3/CENP-A in fission yeast. Shiroiwa Y, et al. PLoS One, 2011 Mar 21. PMID 21445296, Free PMC Article
  3. Large scale screening of genetic interaction with sgf73(+) in fission yeast. Guo Y, et al. Yi Chuan, 2014 Jul. PMID 25076038
  4. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
  5. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding ISM
Inferred from Sequence Model
more info
  
enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in actin cortical patch assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in actin filament organization IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of clathrin-dependent endocytosis ISO
Inferred from Sequence Orthology
more info
  
involved_in signaling IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
is_active_in actin cortical patch ISO
Inferred from Sequence Orthology
more info
  
is_active_in cytoplasm HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Ark1/Prk1 family protein kinase Ppk30

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2627299..2630878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021995.3 → NP_596081.1  Ark1/Prk1 family protein kinase Ppk30 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596081.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O43066
    Conserved Domains (2) summary
    smart00220
    Location:59 → 328
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14037
    Location:53 → 329
    STKc_NAK_like; Catalytic domain of Numb-Associated Kinase (NAK)-like Serine/Threonine kinases
Nucleotide Protein
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