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transmembrane transporter [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541241, updated on 18-Sep-2024

Summary

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Official Full Name
transmembrane transporter
Primary source
PomBase:SPBC887.17
Locus tag
SPOM_SPBC887.17
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (3575443..3578114)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene SAGA complex subunit Hfi1/Ada1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Man5GlcNac2-PP-Dol translocation protein Rft1 Neighboring gene imidazoleglycerol-phosphate synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The fission yeast FLCN/FNIP complex augments TORC1 repression or activation in response to amino acid (AA) availability. Calvo IA, et al. iScience, 2021 Nov 19. PMID 34805795, Free PMC Article
  2. High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library. Varberg JM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33109728, Free PMC Article
  3. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
  4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables adenine transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables guanine transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables purine nucleobase transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in adenine import across plasma membrane IC
Inferred by Curator
more info
  
involved_in adenine transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in guanine import across plasma membrane IC
Inferred by Curator
more info
  
involved_in guanine transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus HDA PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
transmembrane transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3575443..3578114
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022411.3 → NP_596491.1  transmembrane transporter [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596491.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94300
    Conserved Domains (2) summary
    COG2252
    Location:20 → 499
    AzgA; Xanthine/uracil/vitamin C permease, AzgA family [Nucleotide transport and metabolism]
    pfam00860
    Location:46 → 479
    Xan_ur_permease; Permease family
Nucleotide Protein
Heading Accession and Version

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