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sec31 COPII-coated vesicle-associated protein Sec31 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541273, updated on 18-Sep-2024

Summary

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Official Symbol
sec31
Official Full Name
COPII-coated vesicle-associated protein Sec31
Primary source
PomBase:SPBC8D2.20c
Locus tag
SPOM_SPBC8D2.20C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See sec31 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (1393345..1399637, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene adenosylhomocysteinase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene serine/threonine protein kinase Mde3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene TIM23 translocase complex subunit Tim50

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Three proteins required for early steps in the protein secretory pathway also affect nuclear envelope structure and cell cycle progression in fission yeast. Matynia A, et al. J Cell Sci, 2002 Jan 15. PMID 11839792
  2. Cross-species protein interactome mapping reveals species-specific wiring of stress response pathways. Das J, et al. Sci Signal, 2013 May 21. PMID 23695164, Free PMC Article
  3. A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response. Ptushkina M, et al. Sci Rep, 2017 Sep 21. PMID 28935859, Free PMC Article
  4. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article
  5. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables structural molecule activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in COPII-coated vesicle cargo loading IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in endoplasmic reticulum membrane organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in endoplasmic reticulum organization IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytoplasm HDA PubMed 
is_active_in cytosol HDA PubMed 
is_active_in endoplasmic reticulum exit site IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
COPII-coated vesicle-associated protein Sec31

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1393345..1399637 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021477.3 → NP_595582.1  COPII-coated vesicle-associated protein Sec31 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595582.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13637
    Conserved Domains (6) summary
    COG2319
    Location:99 → 414
    WD40; WD40 repeat [General function prediction only]
    pfam02389
    Location:948 → 1083
    Cornifin; Cornifin (SPRR) family
    pfam05350
    Location:962 → 1090
    GSK-3_bind; Glycogen synthase kinase-3 binding
    pfam07304
    Location:1074 → 1217
    SRA1; Steroid receptor RNA activator (SRA1)
    sd00039
    Location:11 → 62
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:81 → 332
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
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