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pop7 Rnase P/MRP subunit Pop7 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541332, updated on 22-Jun-2024

Summary

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Gene symbol
pop7
Gene description
Rnase P/MRP subunit Pop7
Locus tag
SPOM_SPBP8B7.01C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPBP8B7.01c
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Genomic context

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See pop7 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (3633502..3634614, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein Rng9 Neighboring gene 60S ribosomal protein uL4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNase MRP cleaves pre-tRNASer-Met in the tRNA maturation pathway. Saito Y, et al. PLoS One, 2014. PMID 25401760, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
contributes_to ribonuclease MRP activity EXP
Inferred from Experiment
more info
 PubMed 
enables ribonuclease P activity ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in intronic box C/D snoRNA processing ISO
Inferred from Sequence Orthology
more info
  
involved_in tRNA 5'-leader removal IEA
Inferred from Electronic Annotation
more info
  
involved_in tRNA processing IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in tRNA processing IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleolar ribonuclease P complex ISO
Inferred from Sequence Orthology
more info
  
is_active_in nucleolus HDA PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of ribonuclease MRP complex EXP
Inferred from Experiment
more info
 PubMed 

General protein information

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Preferred Names
Rnase P/MRP subunit Pop7

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3633502..3634614 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022429.3 → NP_596508.1  Rnase P/MRP subunit Pop7 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596508.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94251
    Conserved Domains (1) summary
    pfam12328
    Location:11 → 99
    Rpp20; Rpp20 subunit of nuclear RNase MRP and P
Nucleotide Protein
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