U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

vac7 protein vac7 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541367, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
vac7
Official Full Name
protein vac7
Primary source
PomBase:SPBP8B7.13
Locus tag
SPOM_SPBP8B7.13
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See vac7 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (3655431..3656797)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ubiquitin protease cofactor Nxt3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CENP-H-like protein Fta3 Neighboring gene DNA polymerase epsilon catalytic subunit B Dpb2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene RBBP6 family ubiquitin-protein ligase E3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article
  2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in phosphatidylinositol metabolic process ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus HDA PubMed 
part_of PAS complex ISO
Inferred from Sequence Orthology
more info
  
is_active_in endoplasmic reticulum HDA PubMed 
is_active_in fungal-type vacuole membrane IC
Inferred by Curator
more info
  

General protein information

Go to the top of the page Help
Preferred Names
protein vac7

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3655431..3656797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022441.3 → NP_596520.1  protein vac7 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596520.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94262
    Conserved Domains (1) summary
    pfam12751
    Location:11 → 174
    Vac7; Vacuolar segregation subunit 7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials