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gal1 galactokinase Gal1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541380, updated on 18-Sep-2024

Summary

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Official Symbol
gal1
Official Full Name
galactokinase Gal1
Primary source
PomBase:SPBPB2B2.13
Locus tag
SPOM_SPBPB2B2.13
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See gal1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (4488298..4490271)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene UDP-glucose 4-epimerase/aldose 1-epimerase Gal10 Neighboring gene nucleotide-sugar 4,6-dehydratase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
  2. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables galactokinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in UDP-galactose biosynthetic process IC
Inferred by Curator
more info
  
involved_in galactose metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm HDA PubMed 
is_active_in cytosol HDA PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
galactokinase Gal1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    4488298..4490271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023882.3 → NP_596859.1  galactokinase Gal1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596859.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9HDU2
    Conserved Domains (4) summary
    COG0153
    Location:15 → 515
    GalK; Galactokinase [Carbohydrate transport and metabolism]
    pfam00288
    Location:149 → 217
    GHMP_kinases_N; GHMP kinases N terminal domain
    pfam08544
    Location:416 → 487
    GHMP_kinases_C; GHMP kinases C terminal
    pfam10509
    Location:28 → 75
    GalKase_gal_bdg; Galactokinase galactose-binding signature
Nucleotide Protein
Heading Accession and Version

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