U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

spo7 ArfGEF Spo7 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541456, updated on 22-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
spo7
Gene description
ArfGEF Spo7
Locus tag
SPOM_SPAC6G9.04
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
mug79
Old locus tag
SPAC6G9.04
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See spo7 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (3247759..3252881)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene RNA-binding protein Nop9 Neighboring gene ncRNA Neighboring gene histone H3.3 H4 heterotetramer chaperone Rtt106 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene coenzyme A diphosphatase Neighboring gene ncRNA Neighboring gene gamma tubulin complex linker, pericentrin/kendrin Pcp1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The fission yeast pleckstrin homology domain protein Spo7 is essential for initiation of forespore membrane assembly and spore morphogenesis. Nakamura-Kubo M, et al. Mol Biol Cell, 2011 Sep. PMID 21775631, Free PMC Article
  2. Systematic localization study on novel proteins encoded by meiotically up-regulated ORFs in fission yeast. Ikebe C, et al. Biosci Biotechnol Biochem, 2011. PMID 22146723
  3. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Spo7 coordinates formation of the leading edge and initiation of the forespore membrane (FSM) assembly, thereby accomplishing accurate formation of the FSM.
    Title: The fission yeast pleckstrin homology domain protein Spo7 is essential for initiation of forespore membrane assembly and spore morphogenesis.
Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
  
enables phosphatidylinositol-3-phosphate binding IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in ascospore-type prospore membrane formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in ascospore-type prospore-specific spindle pole body remodeling IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in spore membrane bending pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm HDA PubMed 
is_active_in meiotic spindle pole body IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in mitotic spindle HDA PubMed 
is_active_in nuclear envelope HDA PubMed 
is_active_in nuclear periphery IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ArfGEF Spo7

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3247759..3252881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019537.3 → NP_594113.1  ArfGEF Spo7 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594113.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q92349
    Conserved Domains (2) summary
    smart00233
    Location:1057 → 1154
    PH; Pleckstrin homology domain
    pfam00169
    Location:1057 → 1154
    PH; PH domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials