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pop100 Rnase P/MRP subunit [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541548, updated on 18-Sep-2024

Summary

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Official Symbol
pop100
Official Full Name
Rnase P/MRP subunit
Primary source
PomBase:SPAC25B8.16
Locus tag
SPOM_SPAC25B8.16
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See pop100 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (4187314..4189859)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene kinetochore protein mal2 Neighboring gene wybutosine biosynthesis protein Tyw3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene intramembrane aspartyl protease of the perinuclear ER membrane Ypf1 Neighboring gene electron carrier protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a 100-kDa protein associated with nuclear ribonuclease P activity in Schizosaccharomyces pombe. Zimmerly S, et al. Eur J Biochem, 1993 Oct 15. PMID 8223594
  2. The methyl phosphate capping enzyme Bmc1/Bin3 is a stable component of the fission yeast telomerase holoenzyme. Porat J, et al. Nat Commun, 2022 Mar 11. PMID 35277511, Free PMC Article
  3. RNase MRP cleaves pre-tRNASer-Met in the tRNA maturation pathway. Saito Y, et al. PLoS One, 2014. PMID 25401760, Free PMC Article
  4. Large-scale screening of intracellular protein localization in living fission yeast cells by the use of a GFP-fusion genomic DNA library. Ding DQ, et al. Genes Cells, 2000 Mar. PMID 10759889
  5. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
contributes_to ribonuclease MRP activity EXP
Inferred from Experiment
more info
 PubMed 
contributes_to ribonuclease P activity ISO
Inferred from Sequence Orthology
more info
  
enables tRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in tRNA 5'-leader removal ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in tRNA processing IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in tRNA processing IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleolar ribonuclease P complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleolus HDA PubMed 
is_active_in nucleus HDA PubMed 
part_of ribonuclease MRP complex EXP
Inferred from Experiment
more info
 PubMed 
part_of ribonuclease MRP complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of ribonuclease P complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Rnase P/MRP subunit

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4187314..4189859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019905.3 → NP_594476.1  Rnase P/MRP subunit [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594476.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UTA4, Q9UU39
    Conserved Domains (2) summary
    pfam06978
    Location:43 → 234
    POP1; Ribonucleases P/MRP protein subunit POP1
    pfam08170
    Location:473 → 567
    POPLD; POPLD (NUC188) domain
Nucleotide Protein
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