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rna14 cleavage and polyadenylation specificity factor complex subunit Rna14 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541600, updated on 18-Sep-2024

Summary

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Official Symbol
rna14
Official Full Name
cleavage and polyadenylation specificity factor complex subunit Rna14
Primary source
PomBase:SPAC6F12.17
Locus tag
SPOM_SPAC6F12.17
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See rna14 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (1348764..1351231)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene anaphase-promoting complex TPR lobe subcomplex subunit Apc8 Neighboring gene ncRNA Neighboring gene anaphase-promoting complex TPR lobe subcomplex subunit Cut9/Apc6 Neighboring gene TRAMP complex ATP-dependent RNA helicase subunit Mtr4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene nucleoporin Nup40 Neighboring gene ncRNA Neighboring gene NIMA-like serine/threonine protein kinase Fin1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Fission yeast Ctf1, a cleavage and polyadenylation factor subunit is required for the maintenance of genomic integrity. Sonkar A, et al. Mol Genet Genomics, 2017 Oct. PMID 28567704
  2. Mutant allele of rna14 in fission yeast affects pre-mRNA splicing. Yadav S, et al. J Genet, 2016 Jun. PMID 27350684
  3. Cleavage and polyadenylation factor, Rna14 is an essential protein required for the maintenance of genomic integrity in fission yeast Schizosaccharomyces pombe. Sonkar A, et al. Biochim Biophys Acta, 2016 Feb. PMID 26581324
  4. Condensin locates at transcriptional termination sites in mitosis, possibly releasing mitotic transcripts. Nakazawa N, et al. Open Biol, 2019 Oct 31. PMID 31615333, Free PMC Article
  5. The conserved protein Seb1 drives transcription termination by binding RNA polymerase II and nascent RNA. Wittmann S, et al. Nat Commun, 2017 Apr 3. PMID 28367989, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in RNA 3'-end processing IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in chromatin IDA
Inferred from Direct Assay
more info
 PubMed 
part_of mRNA cleavage stimulating factor complex ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
cleavage and polyadenylation specificity factor complex subunit Rna14

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1348764..1351231
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018733.3 → NP_593303.1  cleavage and polyadenylation specificity factor complex subunit Rna14 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593303.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14233
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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