U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

elp3 elongator complex histone acetyltransferase subunit Elp3 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541614, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
elp3
Official Full Name
elongator complex histone acetyltransferase subunit Elp3
Primary source
PomBase:SPAC29A4.20
Locus tag
SPOM_SPAC29A4.20
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
kat9
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See elp3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (5104252..5106339, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein mug95 Neighboring gene RSC-type complex ATPase Snf21 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ca(2+)/Mn(2+)-transporting P-type ATPase P5 type Cta5

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Elongator subunit Elp3 is a non-canonical tRNA acetyltransferase. Lin TY, et al. Nat Commun, 2019 Feb 7. PMID 30733442, Free PMC Article
  2. Expression profiling of S. pombe acetyltransferase mutants identifies redundant pathways of gene regulation. Nugent RL, et al. BMC Genomics, 2010 Jan 22. PMID 20096118, Free PMC Article
  3. Modification of tRNA(Lys) UUU by elongator is essential for efficient translation of stress mRNAs. Fernández-Vázquez J, et al. PLoS Genet, 2013. PMID 23874237, Free PMC Article
  4. Elp3 and Dph3 of Schizosaccharomyces pombe mediate cellular stress responses through tRNA(Lys)(UUU) modifications. Villahermosa D, et al. Sci Rep, 2017 Aug 3. PMID 28775286, Free PMC Article
  5. Translational control of cell division by Elongator. Bauer F, et al. Cell Rep, 2012 May 31. PMID 22768388, Free PMC Article

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
  
enables tRNA uridine(34) acetyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cytoplasmic translational fidelity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
part_of elongator holoenzyme complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
elongator complex histone acetyltransferase subunit Elp3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    5104252..5106339 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020291.3 → NP_594862.1  elongator complex histone acetyltransferase subunit Elp3 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594862.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14023
    Conserved Domains (1) summary
    COG1243
    Location:14 → 544
    ELP3; Histone acetyltransferase, component of the RNA polymerase elongator complex [Transcription, Chromatin structure and dynamics]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials