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hem14 protoporphyrinogen oxidase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541631, updated on 22-Jun-2024

Summary

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Gene symbol
hem14
Gene description
protoporphyrinogen oxidase
Locus tag
SPOM_SPAC1F5.07C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPAC1F5.07c
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Genomic context

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See hem14 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (276848..278573)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene PAK-like kinase Shk2 Neighboring gene plasma membrane stretch-activated calcium ion channel Yam8 Neighboring gene protein Lhs1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene exocytic docking protein Mso1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables oxygen-dependent protoporphyrinogen oxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in protoporphyrinogen IX biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in mitochondrion ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
protoporphyrinogen oxidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    276848..278573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018266.3 → NP_592866.1  protoporphyrinogen oxidase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_592866.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q10062
    Conserved Domains (3) summary
    COG1232
    Location:1 → 484
    HemY; Protoporphyrinogen oxidase [Coenzyme transport and metabolism]
    pfam13450
    Location:5 → 69
    NAD_binding_8; NAD(P)-binding Rossmann-like domain
    cl19820
    Location:140 → 233
    DUF530; Protein of unknown function (DUF530)
Nucleotide Protein
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