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ltv1 ribosome biogenesis protein Ltv1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541634, updated on 18-Sep-2024

Summary

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Official Symbol
ltv1
Official Full Name
ribosome biogenesis protein Ltv1
Primary source
PomBase:SPAC3F10.17
Locus tag
SPOM_SPAC3F10.17
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See ltv1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (2851898..2853653)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene Spo12 family nuclear protein Neighboring gene UBA domain protein Ucp6 Neighboring gene ncRNA Neighboring gene HSR1-like GTP-binding protein Neighboring gene ncRNA Neighboring gene 60S ribosomal protein eL41 Neighboring gene ncRNA Neighboring gene diphthamide biosynthesis protein Dph3 Neighboring gene DNA mismatch repair protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  2. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene. Lang BF, et al. J Mol Biol, 1985 Aug 5. PMID 4046021

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in ribosomal small subunit biogenesis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in ribosomal small subunit export from nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of preribosome, small subunit precursor IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
ribosome biogenesis protein Ltv1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2851898..2853653
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019376.3 → NP_593949.1  ribosome biogenesis protein Ltv1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593949.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q10191
    Conserved Domains (1) summary
    pfam04180
    Location:8 → 385
    LTV; Low temperature viability protein
Nucleotide Protein
Heading Accession and Version

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