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atg43 mitophagy receptor Atg43 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541681, updated on 18-Sep-2024

Summary

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Official Symbol
atg43
Official Full Name
mitophagy receptor Atg43
Primary source
PomBase:SPAC14C4.01c
Locus tag
SPOM_SPAC14C4.01C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
SPAC19D5.08c
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Genomic context

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See atg43 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (5221803..5226049, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene DNA replication factor C complex subunit Ctf8 Neighboring gene RNA NAD-cap (NAD-forming) hydrolase/RNA pyrophosphohydrolase Din1 Neighboring gene 4-aminobutyrate aminotransferase (GABA transaminase) Neighboring gene ncRNA Neighboring gene Smc5-6 complex SMC P-loop ATPase subunit Smc5 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DASH complex subunit Dad3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Atg43 tethers isolation membranes to mitochondria to promote starvation-induced mitophagy in fission yeast. Fukuda T, et al. Elife, 2020 Nov 3. PMID 33138913, Free PMC Article
  2. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article
  3. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
  4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables mitochondrion autophagosome adaptor activity EXP
Inferred from Experiment
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitophagy EXP
Inferred from Experiment
more info
 PubMed 
Component Evidence Code Pubs
is_active_in mitochondrial outer membrane EXP
Inferred from Experiment
more info
 PubMed 
is_active_in mitochondrion HDA PubMed 

General protein information

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Preferred Names
mitophagy receptor Atg43

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    5221803..5226049 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020337.3 → NP_594906.2  mitophagy receptor Atg43 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594906.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13709, Q9Y828
    Conserved Domains (1) summary
    pfam08589
    Location:113 → 194
    DUF1770; Fungal protein of unknown function (DUF1770)
Nucleotide Protein
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