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pof11 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541707, updated on 22-Aug-2024

Summary

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Official Symbol
pof11
Primary source
PomBase:SPAC29E6.01
Locus tag
SPOM_SPAC29E6.01
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
mug156; SPAC30.05
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Genomic context

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See pof11 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003424.3 (4401782..4403868)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene vacuolar phytochelatin and glutathione S-conjugate ABC family transmembrane transporter Abc4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene U4/U5/U6 small nuclear ribonucleoprotein complex subunit Prp3 Neighboring gene ER to Golgi tether Uso1 Neighboring gene MIS12/MIND complex subunit Nnf1 Neighboring gene peptide methionine sulfoxide reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CAND1 controls in vivo dynamics of the cullin 1-RING ubiquitin ligase repertoire. Wu S, et al. Nat Commun, 2013. PMID 23535663, Free PMC Article
  2. Molecular interactions of fission yeast Skp1 and its role in the DNA damage checkpoint. Lehmann A, et al. Genes Cells, 2004 May. PMID 15147268
  3. Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes. Dixon SJ, et al. Proc Natl Acad Sci U S A, 2008 Oct 28. PMID 18931302, Free PMC Article
  4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables ubiquitin-like ligase-substrate adaptor activity ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process ISM
Inferred from Sequence Model
more info
  
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex ISM
Inferred from Sequence Model
more info
  
is_active_in cytosol HDA PubMed 

General protein information

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Preferred Names
F-box/WD repeat protein Pof11

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4401782..4403868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019988.3 → NP_594559.1  F-box/WD repeat protein Pof11 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594559.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q09855, Q9P7V1
    Conserved Domains (4) summary
    COG2319
    Location:206 → 501
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:222 → 496
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam12937
    Location:77 → 119
    F-box-like; F-box-like
    sd00039
    Location:224 → 259
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
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