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fap2 L-saccharopine oxidase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541766, updated on 18-Sep-2024

Summary

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Official Symbol
fap2
Official Full Name
L-saccharopine oxidase
Primary source
PomBase:SPAC139.04c
Locus tag
SPOM_SPAC139.04C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See fap2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (1024002..1025503, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein toe2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene succinate-semialdehyde dehydrogenase Neighboring gene histone acetyltransferase Hat1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of two fructosyl-amino acid oxidase homologs of Schizosaccharomyces pombe. Yoshida N, et al. J Biosci Bioeng, 2004. PMID 16233628
  2. Transcription and chromatin-based surveillance mechanism controls suppression of cryptic antisense transcription. Heo DH, et al. Cell Rep, 2021 Sep 7. PMID 34496258, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IDA
Inferred from Direct Assay
more info
 PubMed 
NOT enables fructosyl-amino acid oxidase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables saccharopine oxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables saccharopine oxidase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables sarcosine oxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in L-lysine catabolic process TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
L-saccharopine oxidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1024002..1025503 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018568.3 → NP_593171.1  L-saccharopine oxidase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593171.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UTM9
    Conserved Domains (1) summary
    COG0665
    Location:1 → 405
    DadA; Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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