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atg22 vacuolar amino acid transmembrane transporter Atg22 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541826, updated on 18-Sep-2024

Summary

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Official Symbol
atg22
Official Full Name
vacuolar amino acid transmembrane transporter Atg22
Primary source
PomBase:SPAC2G11.13
Locus tag
SPOM_SPAC2G11.13
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See atg22 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (836276..838256)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ATP-dependent RNA helicase Prh1 Neighboring gene RecQ type DNA helicase Rqh1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transcription factor TFIID complex, histone acetyltransferase subunit Taf111 Neighboring gene RNA methyltransferase Tgs1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Atg22p, a vacuolar membrane protein involved in the amino acid compartmentalization of Schizosaccharomyces pombe. Sugimoto N, et al. Biosci Biotechnol Biochem, 2011. PMID 21307582
  2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. S. pombe Atg22p plays an important role in the compartmentalization of amino acids
    Title: Atg22p, a vacuolar membrane protein involved in the amino acid compartmentalization of Schizosaccharomyces pombe.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables L-amino acid efflux transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
  
enables L-amino acid transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-alpha-amino acid transmembrane transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in amino acid transmembrane export from vacuole IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in fungal-type vacuole membrane HDA PubMed 
is_active_in fungal-type vacuole membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
vacuolar amino acid transmembrane transporter Atg22

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    836276..838256
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018491.3 → NP_593093.1  vacuolar amino acid transmembrane transporter Atg22 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593093.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q09812
    Conserved Domains (1) summary
    COG2270
    Location:1 → 522
    BtlA; MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only]
Nucleotide Protein
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