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gly1 threonine aldolase Gly1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541852, updated on 22-Jun-2024

Summary

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Gene symbol
gly1
Gene description
threonine aldolase Gly1
Locus tag
SPOM_SPAC23H3.09C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPAC23H3.09c
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Genomic context

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See gly1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (2507707..2509546, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene AP-3 adaptor complex subunit Apl6 Neighboring gene ncRNA Neighboring gene mitochondrial 37S ribosomal protein uS14m Neighboring gene mitotic spindle checkpoint WD repeat protein Bub3 Neighboring gene ncRNA Neighboring gene tRNA-Cys Neighboring gene ncRNA Neighboring gene SWI/SNF and RSC complex subunit Ssr2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The novel proteins Rng8 and Rng9 regulate the myosin-V Myo51 during fission yeast cytokinesis. Wang N, et al. J Cell Biol, 2014 May 12. PMID 24798735, Free PMC Article
  2. A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast. Mathiassen SG, et al. J Biol Chem, 2015 Aug 21. PMID 26152728, Free PMC Article
  3. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814
  4. Transcription and chromatin-based surveillance mechanism controls suppression of cryptic antisense transcription. Heo DH, et al. Cell Rep, 2021 Sep 7. PMID 34496258, Free PMC Article
  5. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables L-allo-threonine aldolase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in glycine biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in threonine catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
threonine aldolase Gly1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2507707..2509546 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019228.3 → NP_593799.1  threonine aldolase Gly1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593799.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13940
    Conserved Domains (1) summary
    cd06502
    Location:30 → 353
    TA_like; Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a ...
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials