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ppx1 exopolyphosphatase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541853, updated on 18-Sep-2024

Summary

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Official Symbol
ppx1
Official Full Name
exopolyphosphatase
Primary source
PomBase:SPAC2F3.11
Locus tag
SPOM_SPAC2F3.11
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See ppx1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (3946555..3947987)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ribonuclease kappa-like protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene GARP complex subunit Vps54 Neighboring gene ncRNA Neighboring gene thioredoxin domain-containing protein Neighboring gene queuine tRNA-ribosyltransferase accessory subunit Qtrtd1/Qtr2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The PAF complex and Prf1/Rtf1 delineate distinct Cdk9-dependent pathways regulating transcription elongation in fission yeast. Mbogning J, et al. PLoS Genet, 2013. PMID 24385927, Free PMC Article
  2. Fitness profiling links topoisomerase II regulation of centromeric integrity to doxorubicin resistance in fission yeast. Nguyen TT, et al. Sci Rep, 2015 Feb 11. PMID 25669599, Free PMC Article
  3. Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth. Rallis C, et al. Biol Open, 2014 Feb 15. PMID 24463365, Free PMC Article
  4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables exopolyphosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in energy reserve metabolic process IC
Inferred by Curator
more info
  
involved_in polyphosphate catabolic process ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
is_active_in mitochondrial matrix ISO
Inferred from Sequence Orthology
more info
  
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
exopolyphosphatase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3946555..3947987
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019812.3 → NP_594390.1  exopolyphosphatase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594390.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14094
    Conserved Domains (3) summary
    COG1227
    Location:28 → 381
    PPX1; Inorganic pyrophosphatase/exopolyphosphatase [Energy production and conversion, Inorganic ion transport and metabolism]
    pfam01368
    Location:114 → 168
    DHH; DHH family
    pfam02833
    Location:237 → 376
    DHHA2; DHHA2 domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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