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toe2 protein toe2 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541956, updated on 18-Sep-2024

Summary

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Official Symbol
toe2
Official Full Name
protein toe2
Primary source
PomBase:SPAC139.03
Locus tag
SPOM_SPAC139.03
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See toe2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003424.3 (1021670..1024135)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene post-transcriptional RNA stability regulator Mkt1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene anion transporter Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene L-saccharopine oxidase Neighboring gene ncRNA Neighboring gene succinate-semialdehyde dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional characterization of fission yeast transcription factors by overexpression analysis. Vachon L, et al. Genetics, 2013 Aug. PMID 23695302, Free PMC Article
  2. Promoter nucleosome dynamics regulated by signalling through the CTD code. Materne P, et al. Elife, 2015 Jun 22. PMID 26098123, Free PMC Article
  3. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article
  4. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding ISM
Inferred from Sequence Model
more info
  
enables zinc ion binding ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in positive regulation of pyrimidine-containing compound salvage IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in chromatin IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in mitotic spindle HDA PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
protein toe2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1021670..1024135
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018567.3 → NP_593170.1  protein toe2 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593170.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UTN0
    Conserved Domains (2) summary
    cd12148
    Location:186 → 581
    fungal_TF_MHR; fungal transcription factor regulatory middle homology region
    smart00066
    Location:17 → 56
    GAL4; GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain
Nucleotide Protein
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