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bet1 SNARE protein Bet1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542068, updated on 18-Sep-2024

Summary

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Official Symbol
bet1
Official Full Name
SNARE protein Bet1
Primary source
PomBase:SPAC23C4.13
Locus tag
SPOM_SPAC23C4.13
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See bet1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003424.3 (1051669..1052724)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene serine/threonine protein kinase (CK1 family) Hhp2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene mannosyltransferase complex subunit Alg1 Neighboring gene ncRNA Neighboring gene DNA-directed RNA polymerase subunit Rpb5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library. Varberg JM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33109728, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables SNAP receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in intracellular protein transport NAS
Non-traceable Author Statement
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus HDA PubMed 
is_active_in endoplasmic reticulum HDA PubMed 
is_active_in fungal-type vacuole membrane HDA PubMed 

General protein information

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Preferred Names
SNARE protein Bet1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1051669..1052724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018581.3 → NP_593185.1  SNARE protein Bet1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593185.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13932
    Conserved Domains (1) summary
    cd15853
    Location:31 → 89
    SNARE_Bet1; SNARE motif of Bet1
Nucleotide Protein
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Gene LinkOut

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