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SPOM_SPAC806.02C iron-sulfur assembly component [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542122, updated on 22-Jun-2024

Summary

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Gene symbol
SPOM_SPAC806.02C
Gene description
iron-sulfur assembly component
Locus tag
SPOM_SPAC806.02C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPAC806.02c
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Genomic context

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See SPOM_SPAC806.02C in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (233032..235139, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene hydroxymethylbilane synthase Neighboring gene ncRNA Neighboring gene 40S ribosomal protein eS26 Neighboring gene uncharacterized protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The role of mitochondria and the CIA machinery in the maturation of cytosolic and nuclear iron-sulfur proteins. Lill R, et al. Eur J Cell Biol, 2015 Jul-Sep. PMID 26099175
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP binding ISO
Inferred from Sequence Orthology
more info
  
enables ATP hydrolysis activity ISO
Inferred from Sequence Orthology
more info
  
enables ATP-dependent FeS chaperone activity IEA
Inferred from Electronic Annotation
more info
  
enables iron-sulfur cluster binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in iron-sulfur cluster assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein maturation by [4Fe-4S] cluster transfer ISO
Inferred from Sequence Orthology
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic [4Fe-4S] assembly targeting complex IEA
Inferred from Electronic Annotation
more info
  
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
iron-sulfur assembly component

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    233032..235139 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018253.3 → NP_592852.1  iron-sulfur assembly component [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_592852.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UT57
    Conserved Domains (5) summary
    COG1149
    Location:8 → 246
    COG1149; MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain [General function prediction only]
    COG2319
    Location:283 → 608
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:283 → 606
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam10609
    Location:3 → 269
    ParA; NUBPL iron-transfer P-loop NTPase
    sd00039
    Location:293 → 330
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
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