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ubi5 ubiquitin-40S ribosomal protein S31 fusion protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542138, updated on 18-Sep-2024

Summary

Official Symbol
ubi5
Official Full Name
ubiquitin-40S ribosomal protein S31 fusion protein
Primary source
PomBase:SPAC589.10c
Locus tag
SPOM_SPAC589.10C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

See ubi5 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (3108199..3108893, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene WD repeat-containing protein Atg1801 Neighboring gene DASH complex subunit Dam1 Neighboring gene sec14 family protein Neighboring gene ncRNA Neighboring gene translation release factor Neighboring gene glycosylceramide biosynthesis protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein tag activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
enables ubiquitin protein ligase binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in cytoplasmic translation ISO
Inferred from Sequence Orthology
more info
 
involved_in modification-dependent protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein ubiquitination IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in ribosome biogenesis ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of cytosolic small ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleolus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
ubiquitin-40S ribosomal protein S31 fusion protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3108199..3108893 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019482.3NP_594058.1  ubiquitin-40S ribosomal protein S31 fusion protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594058.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0C8R3
    Conserved Domains (3) summary
    cd01803
    Location:176
    Ubiquitin; Ubiquitin
    smart00213
    Location:171
    UBQ; Ubiquitin homologues
    pfam01599
    Location:103145
    Ribosomal_S27; Ribosomal protein S27a