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ftp105 Ubp5 interacting protein Ftp10 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542168, updated on 18-Sep-2024

Summary

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Official Symbol
ftp105
Official Full Name
Ubp5 interacting protein Ftp10
Primary source
PomBase:SPAC17A5.16
Locus tag
SPOM_SPAC17A5.16
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See ftp105 in Genome Data Viewer
Location:
chromosome: I
Exon count:
8
Sequence:
Chromosome: I; NC_003424.3 (1786370..1790355)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene exonuclease II Exo2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene glutamate-tRNA ligase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein saf5 Neighboring gene mitochondrial 54S ribosomal protein uL1m

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Systematic localization study on novel proteins encoded by meiotically up-regulated ORFs in fission yeast. Ikebe C, et al. Biosci Biotechnol Biochem, 2011. PMID 22146723
  2. A global census of fission yeast deubiquitinating enzyme localization and interaction networks reveals distinct compartmentalization profiles and overlapping functions in endocytosis and polarity. Kouranti I, et al. PLoS Biol, 2010 Sep 7. PMID 20838651, Free PMC Article
  3. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article
  4. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
  5. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus HDA PubMed 
is_active_in Golgi medial cisterna IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in Golgi trans cisterna IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytoplasm HDA PubMed 
is_active_in cytosol HDA PubMed 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Ubp5 interacting protein Ftp10
NP_593484.1
  • Golgi localized protein, human HID1 ortholog 3, implicated in vesicle-mediated transport

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1786370..1790355
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018917.3 → NP_593484.1  Ubp5 interacting protein Ftp10 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593484.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13776
    Conserved Domains (1) summary
    cl15483
    Location:1 → 851
    Hid1; High-temperature-induced dauer-formation protein
Nucleotide Protein
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