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ned1 lipin, phosphatidate phosphatase Ned1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542274, updated on 18-Sep-2024

Summary

Official Symbol
ned1
Official Full Name
lipin, phosphatidate phosphatase Ned1
Primary source
PomBase:SPAC1952.13
Locus tag
SPOM_SPAC1952.13
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

See ned1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003424.3 (4991128..4993629)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene nickel-dependent urease Ure2 Neighboring gene ncRNA Neighboring gene COP9/signalosome complex subunit 7a Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene mitochondrial 54S ribosomal protein mL59 Neighboring gene meiotic recombination protein Rec24

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables magnesium ion binding ISM
Inferred from Sequence Model
more info
 
enables phosphatidate phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in fatty acid catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in lipid storage IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in nuclear membrane organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
NOT involved_in nucleocytoplasmic transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in triglyceride biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus EXP
Inferred from Experiment
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
lipin, phosphatidate phosphatase Ned1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4991128..4993629
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020244.3NP_594815.1  lipin, phosphatidate phosphatase Ned1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594815.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UUJ6
    Conserved Domains (3) summary
    COG5083
    Location:1592
    SMP2; Phosphatidate phosphatase PAH1, contains Lipin and LNS2 domains. can be involved in plasmid maintenance [Lipid transport and metabolism]
    pfam04571
    Location:199
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:334560
    LNS2; LNS2 (Lipin/Ned1/Smp2)