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pdt1 Nramp family Mn(2+) transporter [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542283, updated on 18-Sep-2024

Summary

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Official Symbol
pdt1
Official Full Name
Nramp family Mn(2+) transporter
Primary source
PomBase:SPAC27F1.08
Locus tag
SPOM_SPAC27F1.08
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See pdt1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (4330960..4333166)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene FKBP-type peptidyl-prolyl cis-trans isomerase Neighboring gene ncRNA Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase Ost1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene U2 snRNP-associated protein SF3B1 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pmr1, a P-type ATPase, and Pdt1, an Nramp homologue, cooperatively regulate cell morphogenesis in fission yeast: the importance of Mn2+ homeostasis. Maeda T, et al. Genes Cells, 2004 Jan. PMID 14723709
  2. Coordinated Roles of the Putative Ceramide-Conjugation Protein, Cwh43, and a Mn(2+)-Transporting, P-Type ATPase, Pmr1, in Fission Yeast. Nakazawa N, et al. G3 (Bethesda), 2019 Aug 8. PMID 31201205, Free PMC Article
  3. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article
  4. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables cadmium ion transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables manganese ion transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in intracellular manganese ion homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in intracellular manganese ion homeostasis IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in iron ion transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in manganese ion transmembrane transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in manganese ion transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Nramp family Mn(2+) transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4330960..4333166
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019966.3 → NP_594537.1  Nramp family Mn(2+) transporter [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594537.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q10177
    Conserved Domains (2) summary
    TIGR01197
    Location:69 → 466
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters
    pfam01566
    Location:93 → 466
    Nramp; Natural resistance-associated macrophage protein
Nucleotide Protein
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