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dal1 ureidoglycolate hydrolase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542470, updated on 18-Sep-2024

Summary

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Official Symbol
dal1
Official Full Name
ureidoglycolate hydrolase
Primary source
PomBase:SPAC19G12.04
Locus tag
SPOM_SPAC19G12.04
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See dal1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (4049534..4050971)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene MutL family mismatch-repair protein Pms1 Neighboring gene ncRNA Neighboring gene chitin deacetylase Cda1 Neighboring gene citrate transporter Neighboring gene ncRNA Neighboring gene histone H2A beta Neighboring gene ncRNA Neighboring gene RNA-binding protein Rsd1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cross-species protein interactome mapping reveals species-specific wiring of stress response pathways. Das J, et al. Sci Signal, 2013 May 21. PMID 23695164, Free PMC Article
  2. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ureidoglycolate hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables ureidoglycolate lyase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in allantoin catabolic process ISO
Inferred from Sequence Orthology
more info
  
involved_in purine nucleobase catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
ureidoglycolate hydrolase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4049534..4050971
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019848.3 → NP_594419.1  ureidoglycolate hydrolase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594419.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13843
    Conserved Domains (1) summary
    COG3194
    Location:3 → 191
    AllA; Ureidoglycolate hydrolase (allantoin degradation) [Nucleotide transport and metabolism]
Nucleotide Protein
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