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sle1 protein sle1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542484, updated on 18-Sep-2024

Summary

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Official Symbol
sle1
Official Full Name
protein sle1
Primary source
PomBase:SPAC1A6.07
Locus tag
SPOM_SPAC1A6.07
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
seg1
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Genomic context

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See sle1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (1084092..1086426)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene triacylglycerol lipase Neighboring gene ncRNA Neighboring gene protein meu31 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein mug125 Neighboring gene sphingosine N-acyltransferase Lag1 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Seg1 controls eisosome assembly and shape. Moreira KE, et al. J Cell Biol, 2012 Aug 6. PMID 22869600, Free PMC Article
  2. Comprehensive proteomics analysis reveals new substrates and regulators of the fission yeast clp1/cdc14 phosphatase. Chen JS, et al. Mol Cell Proteomics, 2013 May. PMID 23297348, Free PMC Article
  3. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in plasma membrane organization IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
is_active_in cell cortex of cell tip IDA
Inferred from Direct Assay
more info
 PubMed 
part_of eisosome filament IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
protein sle1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1084092..1086426
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018595.3 → NP_593199.1  protein sle1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593199.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13858, Q9UU73
    Conserved Domains (2) summary
    pfam03157
    Location:354 → 450
    Glutenin_hmw; High molecular weight glutenin subunit
    pfam08580
    Location:49 → 239
    KAR9; Yeast cortical protein KAR9
Nucleotide Protein
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