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pan3 poly(A)-specific ribonuclease complex subunit Pan3 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542552, updated on 18-Sep-2024

Summary

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Official Symbol
pan3
Official Full Name
poly(A)-specific ribonuclease complex subunit Pan3
Primary source
PomBase:SPAC1B1.04c
Locus tag
SPOM_SPAC1B1.04C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See pan3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
8
Sequence:
Chromosome: I; NC_003424.3 (3544706..3547317, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene karyopherin/importin beta family nuclear import signal receptor Kap95 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 5S ribosomal RNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The CCR4-NOT complex is implicated in the viability of aneuploid yeasts. Tange Y, et al. PLoS Genet, 2012. PMID 22737087, Free PMC Article
  2. The fission yeast nucleoporin Alm1 is required for proteasomal degradation of kinetochore components. Salas-Pino S, et al. J Cell Biol, 2017 Nov 6. PMID 28974540, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables poly(A) binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
  
involved_in nuclear-transcribed mRNA poly(A) tail shortening IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in P-body IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of PAN complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 

General protein information

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Preferred Names
poly(A)-specific ribonuclease complex subunit Pan3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3544706..3547317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019657.3 → NP_594234.2  poly(A)-specific ribonuclease complex subunit Pan3 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594234.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13865
    Conserved Domains (2) summary
    cd00180
    Location:299 → 456
    PKc; Catalytic domain of Protein Kinases
    cl21453
    Location:405 → 510
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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