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mga2 IPT/TIG ankyrin repeat-containing transcription regulator [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542701, updated on 18-Sep-2024

Summary

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Official Symbol
mga2
Official Full Name
IPT/TIG ankyrin repeat-containing transcription regulator
Primary source
PomBase:SPAC26H5.05
Locus tag
SPOM_SPAC26H5.05
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See mga2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (4125083..4128805)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein Gid5 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene shelterin complex subunit Pot1 Neighboring gene seven transmembrane receptor protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of mutants with increased variation in cell size at onset of mitosis in fission yeast. Scotchman E, et al. J Cell Sci, 2021 Feb 11. PMID 33419777, Free PMC Article
  2. Polo boxes form a single functional domain that mediates interactions with multiple proteins in fission yeast polo kinase. Reynolds N, et al. J Cell Sci, 2003 Apr 1. PMID 12615979
  3. Cross-species protein interactome mapping reveals species-specific wiring of stress response pathways. Das J, et al. Sci Signal, 2013 May 21. PMID 23695164, Free PMC Article
  4. Systematic analysis reveals the prevalence and principles of bypassable gene essentiality. Li J, et al. Nat Commun, 2019 Mar 1. PMID 30824696, Free PMC Article
  5. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables double-stranded DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables transcription coregulator activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
  
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasmic side of endoplasmic reticulum membrane IC
Inferred by Curator
more info
  
is_active_in fungal-type vacuole HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
IPT/TIG ankyrin repeat-containing transcription regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4125083..4128805
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019881.3 → NP_594452.1  IPT/TIG ankyrin repeat-containing transcription regulator [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594452.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13987
    Conserved Domains (4) summary
    cd00102
    Location:658 → 741
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
    cd00204
    Location:853 → 938
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam13637
    Location:862 → 911
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:861 → 892
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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