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mde6 muskelin [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542769, updated on 18-Sep-2024

Summary

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Official Symbol
mde6
Official Full Name
muskelin
Primary source
PomBase:SPAC15A10.10
Locus tag
SPOM_SPAC15A10.10
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See mde6 in Genome Data Viewer
Location:
chromosome: I
Exon count:
6
Sequence:
Chromosome: I; NC_003424.3 (3696565..3700027)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene alpha-actinin Neighboring gene ncRNA Neighboring gene SUR7 family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Cys Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article
  2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
muskelin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3696565..3700027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019720.4 → NP_594297.2  muskelin [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594297.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13730
    Conserved Domains (4) summary
    sd00038
    Location:263 → 308
    Kelch; KELCH repeat [structural motif]
    pfam01344
    Location:262 → 302
    Kelch_1; Kelch motif
    pfam06588
    Location:2 → 206
    Muskelin_N; Muskelin N-terminus
    pfam07646
    Location:314 → 367
    Kelch_2; Kelch motif
Nucleotide Protein
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