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cox1101 rsm22-cox11 tandem protein cox1101 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542827, updated on 18-Sep-2024

Summary

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Official Symbol
cox1101
Official Full Name
rsm22-cox11 tandem protein cox1101
Primary source
PomBase:SPAC1420.04c
Locus tag
SPOM_SPAC1420.04C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
cox11; SPAPB17E12.01c
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Genomic context

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See cox1101 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (1267830..1270166, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene chaperonin-containing T-complex epsilon subunit Cct5 Neighboring gene 19S proteasome regulatory subunit Rpn501 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene SMN complex subunit Yip12/Gem2 Neighboring gene ubiquitin-protein ligase E3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequential processing of a mitochondrial tandem protein: insights into protein import in Schizosaccharomyces pombe. Khalimonchuk O, et al. Eukaryot Cell, 2006 Jul. PMID 16835444, Free PMC Article
  2. Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome. Telekawa C, et al. Nucleic Acids Res, 2018 Nov 30. PMID 30321377, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables copper ion binding ISO
Inferred from Sequence Orthology
more info
  
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables methyltransferase activity ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in mitochondrial cytochrome c oxidase assembly ISO
Inferred from Sequence Orthology
more info
  
involved_in mitochondrial translation NAS
Non-traceable Author Statement
more info
  
Component Evidence Code Pubs
is_active_in mitochondrial inner membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in mitochondrial inner membrane IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in mitochondrial matrix IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in mitochondrion HDA PubMed 

General protein information

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Preferred Names
rsm22-cox11 tandem protein cox1101

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1267830..1270166 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018675.3 → NP_593279.2  rsm22-cox11 tandem protein cox1101 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593279.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UTM2
    Conserved Domains (2) summary
    COG3175
    Location:565 → 753
    COX11; Cytochrome c oxidase assembly protein Cox11 [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]
    COG5459
    Location:59 → 561
    Rsm22; Ribosomal protein RSM22 (predicted mitochondrial rRNA methylase) [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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