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msa1 RNA-binding protein Msa1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542861, updated on 18-Sep-2024

Summary

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Official Symbol
msa1
Official Full Name
RNA-binding protein Msa1
Primary source
PomBase:SPAC13G7.13c
Locus tag
SPOM_SPAC13G7.13C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
SPAC6C3.01c
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Genomic context

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See msa1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (2318492..2322825, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene choline kinase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CHCH domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Interaction between a negative regulator (Msa2/Nrd1) and a positive regulator (Cpc2) of sexual differentiation in Schizosaccharomyces pombe. Jeong HT, et al. Biosci Biotechnol Biochem, 2004 Jul. PMID 15277777
  2. A novel gene, msa1, inhibits sexual differentiation in Schizosaccharomyces pombe. Jeong HT, et al. Genetics, 2004 May. PMID 15166138, Free PMC Article
  3. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article
  4. Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth. Rallis C, et al. Biol Open, 2014 Feb 15. PMID 24463365, Free PMC Article
  5. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Msa1, a putative RNA-binding protein, inhibits sexual differentiation in Schizosaccharomyces pombe. [Msa1]
    Title: A novel gene, msa1, inhibits sexual differentiation in Schizosaccharomyces pombe.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in negative regulation of conjugation with cellular fusion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in negative regulation of gene expression IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 

General protein information

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Preferred Names
RNA-binding protein Msa1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2318492..2322825 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019146.3 → NP_593715.2  RNA-binding protein Msa1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593715.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q10277, Q9US63
    Conserved Domains (4) summary
    cd00590
    Location:171 → 219
    RRM_SF; RNA recognition motif (RRM) superfamily
    cd12453
    Location:77 → 162
    RRM1_RIM4_like; RNA recognition motif 1 in yeast meiotic activator RIM4 and similar proteins
    cd12454
    Location:362 → 441
    RRM2_RIM4_like; RNA recognition motif 2 in yeast meiotic activator RIM4 and similar proteins
    TIGR01661
    Location:81 → 421
    ELAV_HUD_SF; ELAV/HuD family splicing factor
Nucleotide Protein
Heading Accession and Version

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