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vas2 AP-1 adaptor complex sigma subunit Aps1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542885, updated on 18-Sep-2024

Summary

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Official Symbol
vas2
Official Full Name
AP-1 adaptor complex sigma subunit Aps1
Primary source
PomBase:SPAP27G11.06c
Locus tag
SPOM_SPAP27G11.06C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
aps1
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Genomic context

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See vas2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003424.3 (1619483..1620346, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene HOPS complex subunit Vps41 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene serine/threonine protein kinase Neighboring gene ncRNA Neighboring gene protein meu32

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sip1, an AP-1 accessory protein in fission yeast, is required for localization of Rho3 GTPase. Yu Y, et al. PLoS One, 2013. PMID 23840894, Free PMC Article
  2. Sip1, a conserved AP-1 accessory protein, is important for Golgi/endosome trafficking in fission yeast. Yu Y, et al. PLoS One, 2012. PMID 23028933, Free PMC Article
  3. Role of the Small GTPase Rho3 in Golgi/Endosome trafficking through functional interaction with adaptin in Fission Yeast. Kita A, et al. PLoS One, 2011 Feb 3. PMID 21304827, Free PMC Article
  4. Deletion mutants of AP-1 adaptin subunits display distinct phenotypes in fission yeast. Ma Y, et al. Genes Cells, 2009 Aug. PMID 19624755
  5. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
contributes_to clathrin adaptor activity IC
Inferred by Curator
more info
  
enables clathrin binding ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in endosome to plasma membrane protein transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of AP-1 adaptor complex IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytosol HDA PubMed 
is_active_in endosome IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
AP-1 adaptor complex sigma subunit Aps1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1619483..1620346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018843.3 → NP_593410.1  AP-1 adaptor complex sigma subunit Aps1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593410.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9P7N2
    Conserved Domains (1) summary
    COG5030
    Location:2 → 153
    APS2; Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion]
Nucleotide Protein
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